Single-cell atlas of colonic CD8+ T cells in ulcerative colitis

D Corridoni, A Antanaviciute, T Gupta… - Nature medicine, 2020 - nature.com
D Corridoni, A Antanaviciute, T Gupta, D Fawkner-Corbett, A Aulicino, M Jagielowicz…
Nature medicine, 2020nature.com
Colonic antigen-experienced lymphocytes such as tissue-resident memory CD8+ T cells can
respond rapidly to repeated antigen exposure. However, their cellular phenotypes and the
mechanisms by which they drive immune regulation and inflammation remain unclear. Here
we compiled an unbiased atlas of human colonic CD8+ T cells in health and ulcerative
colitis (UC) using single-cell transcriptomics with T-cell receptor repertoire analysis and
mass cytometry. We reveal extensive heterogeneity in CD8+ T-cell composition, including …
Abstract
Colonic antigen-experienced lymphocytes such as tissue-resident memory CD8+ T cells can respond rapidly to repeated antigen exposure. However, their cellular phenotypes and the mechanisms by which they drive immune regulation and inflammation remain unclear. Here we compiled an unbiased atlas of human colonic CD8+ T cells in health and ulcerative colitis (UC) using single-cell transcriptomics with T-cell receptor repertoire analysis and mass cytometry. We reveal extensive heterogeneity in CD8+ T-cell composition, including expanded effector and post-effector terminally differentiated CD8+ T cells. While UC-associated CD8+ effector T cells can trigger tissue destruction and produce tumor necrosis factor (TNF)-α, post-effector cells acquire innate signatures to adopt regulatory functions that may mitigate excessive inflammation. Thus, we identify colonic CD8+ T-cell phenotypes in health and UC, define their clonal relationships and characterize terminally differentiated dysfunctional UC CD8+ T cells expressing IL-26, which attenuate acute colitis in a humanized IL-26 transgenic mouse model.
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